File IndexIVF.h

namespace faiss

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree.

Throughout the library, vectors are provided as float * pointers. Most algorithms can be optimized when several vectors are processed (added/searched) together in a batch. In this case, they are passed in as a matrix. When n vectors of size d are provided as float * x, component j of vector i is

x[ i * d + j ]

where 0 <= i < n and 0 <= j < d. In other words, matrices are always compact. When specifying the size of the matrix, we call it an n*d matrix, which implies a row-major storage.

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. I/O functions can read/write to a filename, a file handle or to an object that abstracts the medium.

The read functions return objects that should be deallocated with delete. All references within these objectes are owned by the object.

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. Definition of inverted lists + a few common classes that implement the interface.

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. Since IVF (inverted file) indexes are of so much use for large-scale use cases, we group a few functions related to them in this small library. Most functions work both on IndexIVFs and IndexIVFs embedded within an IndexPreTransform.

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. In this file are the implementations of extra metrics beyond L2 and inner product

Copyright (c) Facebook, Inc. and its affiliates.

This source code is licensed under the MIT license found in the LICENSE file in the root directory of this source tree. Defines a few objects that apply transformations to a set of vectors Often these are pre-processing steps.

Variables

FAISS_API IndexIVFStats indexIVF_stats

struct IndexIVF : public faiss::Index, public faiss::Level1Quantizer

#include <IndexIVF.h>

Index based on a inverted file (IVF)

In the inverted file, the quantizer (an Index instance) provides a quantization index for each vector to be added. The quantization index maps to a list (aka inverted list or posting list), where the id of the vector is stored.

The inverted list object is required only after trainng. If none is set externally, an ArrayInvertedLists is used automatically.

At search time, the vector to be searched is also quantized, and only the list corresponding to the quantization index is searched. This speeds up the search by making it non-exhaustive. This can be relaxed using multi-probe search: a few (nprobe) quantization indices are selected and several inverted lists are visited.

Sub-classes implement a post-filtering of the index that refines the distance estimation from the query to databse vectors.

Subclassed by faiss::IndexIVFAdditiveQuantizer, faiss::IndexIVFFlat, faiss::IndexIVFPQ, faiss::IndexIVFPQFastScan, faiss::IndexIVFScalarQuantizer, faiss::IndexIVFSpectralHash

Public Functions

IndexIVF(Index *quantizer, size_t d, size_t nlist, size_t code_size, MetricType metric = METRIC_L2)

The Inverted file takes a quantizer (an Index) on input, which implements the function mapping a vector to a list identifier.

virtual void reset() override

removes all elements from the database.

virtual void train(idx_t n, const float *x) override

Trains the quantizer and calls train_residual to train sub-quantizers.

virtual void add(idx_t n, const float *x) override

Calls add_with_ids with NULL ids.

virtual void add_with_ids(idx_t n, const float *x, const idx_t *xids) override

default implementation that calls encode_vectors

virtual void add_core(idx_t n, const float *x, const idx_t *xids, const idx_t *precomputed_idx)

Implementation of vector addition where the vector assignments are predefined. The default implementation hands over the code extraction to encode_vectors.

Parameters

precomputed_idx – quantization indices for the input vectors (size n)

virtual void encode_vectors(idx_t n, const float *x, const idx_t *list_nos, uint8_t *codes, bool include_listno = false) const = 0

Encodes a set of vectors as they would appear in the inverted lists

Parameters

• list_nos – inverted list ids as returned by the quantizer (size n). -1s are ignored.

• codes – output codes, size n * code_size

• include_listno – include the list ids in the code (in this case add ceil(log8(nlist)) to the code size)

void add_sa_codes(idx_t n, const uint8_t *codes, const idx_t *xids)

Add vectors that are computed with the standalone codec

Parameters

• codes – codes to add size n * sa_code_size()

• xids – corresponding ids, size n

virtual void train_residual(idx_t n, const float *x)

Sub-classes that encode the residuals can train their encoders here does nothing by default

virtual void search_preassigned(idx_t n, const float *x, idx_t k, const idx_t *assign, const float *centroid_dis, float *distances, idx_t *labels, bool store_pairs, const IVFSearchParameters *params = nullptr, IndexIVFStats *stats = nullptr) const

search a set of vectors, that are pre-quantized by the IVF quantizer. Fill in the corresponding heaps with the query results. The default implementation uses InvertedListScanners to do the search.

Parameters

• n – nb of vectors to query

• x – query vectors, size nx * d

• assign – coarse quantization indices, size nx * nprobe

• centroid_dis – distances to coarse centroids, size nx * nprobe

• distance – output distances, size n * k

• labels – output labels, size n * k

• store_pairs – store inv list index + inv list offset instead in upper/lower 32 bit of result, instead of ids (used for reranking).

• params – used to override the object’s search parameters

• stats – search stats to be updated (can be null)

virtual void search(idx_t n, const float *x, idx_t k, float *distances, idx_t *labels) const override

assign the vectors, then call search_preassign

virtual void range_search(idx_t n, const float *x, float radius, RangeSearchResult *result) const override

query n vectors of dimension d to the index.

return all vectors with distance < radius. Note that many indexes do not implement the range_search (only the k-NN search is mandatory).

Parameters

• x – input vectors to search, size n * d

• radius – search radius

• result – result table

void range_search_preassigned(idx_t nx, const float *x, float radius, const idx_t *keys, const float *coarse_dis, RangeSearchResult *result, bool store_pairs = false, const IVFSearchParameters *params = nullptr, IndexIVFStats *stats = nullptr) const

virtual InvertedListScanner *get_InvertedListScanner(bool store_pairs = false) const

Get a scanner for this index (store_pairs means ignore labels)

The default search implementation uses this to compute the distances

virtual void reconstruct(idx_t key, float *recons) const override

reconstruct a vector. Works only if maintain_direct_map is set to 1 or 2

virtual void update_vectors(int nv, const idx_t *idx, const float *v)

Update a subset of vectors.

The index must have a direct_map

Parameters

• nv – nb of vectors to update

• idx – vector indices to update, size nv

• v – vectors of new values, size nv*d

virtual void reconstruct_n(idx_t i0, idx_t ni, float *recons) const override

Reconstruct a subset of the indexed vectors.

Overrides default implementation to bypass reconstruct() which requires direct_map to be maintained.

Parameters

• i0 – first vector to reconstruct

• ni – nb of vectors to reconstruct

• recons – output array of reconstructed vectors, size ni * d

virtual void search_and_reconstruct(idx_t n, const float *x, idx_t k, float *distances, idx_t *labels, float *recons) const override

Similar to search, but also reconstructs the stored vectors (or an approximation in the case of lossy coding) for the search results.

Overrides default implementation to avoid having to maintain direct_map and instead fetch the code offsets through the store_pairs flag in search_preassigned().

Parameters

recons – reconstructed vectors size (n, k, d)

virtual void reconstruct_from_offset(int64_t list_no, int64_t offset, float *recons) const

Reconstruct a vector given the location in terms of (inv list index + inv list offset) instead of the id.

Useful for reconstructing when the direct_map is not maintained and the inv list offset is computed by search_preassigned() with store_pairs set.

virtual size_t remove_ids(const IDSelector &sel) override

Dataset manipulation functions.

void check_compatible_for_merge(const IndexIVF &other) const

check that the two indexes are compatible (ie, they are trained in the same way and have the same parameters). Otherwise throw.

virtual void merge_from(IndexIVF &other, idx_t add_id)

moves the entries from another dataset to self. On output, other is empty. add_id is added to all moved ids (for sequential ids, this would be this->ntotal

virtual void copy_subset_to(IndexIVF &other, int subset_type, idx_t a1, idx_t a2) const

copy a subset of the entries index to the other index

if subset_type == 0: copies ids in [a1, a2) if subset_type == 1: copies ids if id % a1 == a2 if subset_type == 2: copies inverted lists such that a1 elements are left before and a2 elements are after

~IndexIVF() override

inline size_t get_list_size(size_t list_no) const

void make_direct_map(bool new_maintain_direct_map = true)

intialize a direct map

Parameters

new_maintain_direct_map – if true, create a direct map, else clear it

void set_direct_map_type(DirectMap::Type type)

void replace_invlists(InvertedLists *il, bool own = false)

replace the inverted lists, old one is deallocated if own_invlists

virtual size_t sa_code_size() const override

size of the produced codes in bytes

virtual void sa_encode(idx_t n, const float *x, uint8_t *bytes) const override

encode a set of vectors

Parameters

• n – number of vectors

• x – input vectors, size n * d

• bytes – output encoded vectors, size n * sa_code_size()

IndexIVF()

void train_q1(size_t n, const float *x, bool verbose, MetricType metric_type)

Trains the quantizer and calls train_residual to train sub-quantizers.

size_t coarse_code_size() const

compute the number of bytes required to store list ids

void encode_listno(Index::idx_t list_no, uint8_t *code) const

Index::idx_t decode_listno(const uint8_t *code) const

Public Members

InvertedLists *invlists

Access to the actual data.

bool own_invlists

size_t code_size

code size per vector in bytes

size_t nprobe

number of probes at query time

size_t max_codes

max nb of codes to visit to do a query

int parallel_mode

Parallel mode determines how queries are parallelized with OpenMP

0 (default): split over queries 1: parallelize over inverted lists 2: parallelize over both 3: split over queries with a finer granularity

PARALLEL_MODE_NO_HEAP_INIT: binary or with the previous to prevent the heap to be initialized and finalized

const int PARALLEL_MODE_NO_HEAP_INIT = 1024

DirectMap direct_map

optional map that maps back ids to invlist entries. This enables reconstruct()

Index *quantizer

quantizer that maps vectors to inverted lists

size_t nlist

number of possible key values

char quantizer_trains_alone

= 0: use the quantizer as index in a kmeans training = 1: just pass on the training set to the train() of the quantizer = 2: kmeans training on a flat index + add the centroids to the quantizer

bool own_fields

whether object owns the quantizer (false by default)

ClusteringParameters cp

to override default clustering params

Index *clustering_index

to override index used during clustering

struct IndexIVFStats

Public Functions

inline IndexIVFStats()

void reset()

void add(const IndexIVFStats &other)

Public Members

size_t nq

size_t nlist

size_t ndis

size_t nheap_updates

double quantization_time

double search_time

struct InvertedListScanner

#include <IndexIVF.h>

Object that handles a query. The inverted lists to scan are provided externally. The object has a lot of state, but distance_to_code and scan_codes can be called in multiple threads

Public Types

using idx_t = Index::idx_t

Public Functions

virtual void set_query(const float *query_vector) = 0

from now on we handle this query.

virtual void set_list(idx_t list_no, float coarse_dis) = 0

following codes come from this inverted list

virtual float distance_to_code(const uint8_t *code) const = 0

compute a single query-to-code distance

virtual size_t scan_codes(size_t n, const uint8_t *codes, const idx_t *ids, float *distances, idx_t *labels, size_t k) const

scan a set of codes, compute distances to current query and update heap of results if necessary. Default implemetation calls distance_to_code.

Parameters

• n – number of codes to scan

• codes – codes to scan (n * code_size)

• ids – corresponding ids (ignored if store_pairs)

• distances – heap distances (size k)

• labels – heap labels (size k)

• k – heap size

Returns

number of heap updates performed

virtual void scan_codes_range(size_t n, const uint8_t *codes, const idx_t *ids, float radius, RangeQueryResult &result) const

scan a set of codes, compute distances to current query and update results if distances are below radius

(default implementation fails)

inline virtual ~InvertedListScanner()

Public Members

idx_t list_no = -1

remember current list

bool keep_max = false

keep maximum instead of minimum

bool store_pairs = false

store positions in invlists rather than labels

size_t code_size = 0

used in default implementation of scan_codes

struct IVFSearchParameters

Subclassed by faiss::IVFPQSearchParameters

Public Functions

inline IVFSearchParameters()

inline virtual ~IVFSearchParameters()

Public Members

size_t nprobe

number of probes at query time

size_t max_codes

max nb of codes to visit to do a query

struct Level1Quantizer

#include <IndexIVF.h>

Encapsulates a quantizer object for the IndexIVF

The class isolates the fields that are independent of the storage of the lists (especially training)

Subclassed by faiss::IndexIVF

Public Functions

void train_q1(size_t n, const float *x, bool verbose, MetricType metric_type)

Trains the quantizer and calls train_residual to train sub-quantizers.

size_t coarse_code_size() const

compute the number of bytes required to store list ids

void encode_listno(Index::idx_t list_no, uint8_t *code) const

Index::idx_t decode_listno(const uint8_t *code) const

Level1Quantizer(Index *quantizer, size_t nlist)

Level1Quantizer()

~Level1Quantizer()

Public Members

Index *quantizer

quantizer that maps vectors to inverted lists

size_t nlist

number of possible key values

char quantizer_trains_alone

= 0: use the quantizer as index in a kmeans training = 1: just pass on the training set to the train() of the quantizer = 2: kmeans training on a flat index + add the centroids to the quantizer

bool own_fields

whether object owns the quantizer (false by default)

ClusteringParameters cp

to override default clustering params

Index *clustering_index

to override index used during clustering